Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 HCG4-201ENST00000418983 998 ntBASIC17■□□□□ 0.31
LRRC40Q9H9A6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 AP002469.2-201ENST00000531724 424 ntBASIC17■□□□□ 0.31
LRRC40Q9H9A6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 AC087641.1-201ENST00000557561 1021 ntBASIC17■□□□□ 0.31
LRRC40Q9H9A6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 AC108073.2-201ENST00000464002 357 ntBASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 KRT126P-201ENST00000549467 1181 ntBASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 AC117500.6-201ENST00000624871 588 ntBASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 AL512652.2-201ENST00000625156 1716 ntBASIC16.99■□□□□ 0.31
LRRC40Q9H9A6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 ME2P1-201ENST00000426028 1970 ntBASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 AL671710.1-201ENST00000610245 2349 ntBASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 GGT3P-204ENST00000453783 1664 ntBASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms