Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.38□□□□□ -0.11
CMSS1Q9BQ75 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC126755.1-201ENST00000525846 6405 ntBASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC067930.6-201ENST00000623257 4947 ntBASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMSS1Q9BQ75 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMSS1Q9BQ75 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMSS1Q9BQ75 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CMSS1Q9BQ75 AC024909.3-201ENST00000611513 2257 ntBASIC14.36□□□□□ -0.11
CMSS1Q9BQ75 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CMSS1Q9BQ75 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms