Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 AC092865.7-201ENST00000641832 219 ntBASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 AC136621.1-201ENST00000624017 2304 ntBASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD2Q8IV50 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CDC14C-201ENST00000428251 1719 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 TUBB8P12-201ENST00000308911 1335 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 TUBB7P-202ENST00000428444 1305 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 TUBB8P7-204ENST00000567960 1332 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 UNC93B2-201ENST00000285383 730 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AC009947.2-201ENST00000444014 672 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 RBM17P1-201ENST00000453646 1190 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AP003071.4-201ENST00000562276 1284 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AC233702.5-201ENST00000584107 538 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AL157888.1-201ENST00000631930 593 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 LINC02447-202ENST00000501888 2146 ntBASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms