Protein–RNA interactions for Protein: Q6P3S6

FBXO42, F-box only protein 42, humanhuman

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42Q6P3S6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 KRT18P13-201ENST00000400056 1290 ntBASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 AC092474.2-201ENST00000424288 719 ntBASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 MIR3687-2-201ENST00000577708 61 ntBASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 MIR3687-1-201ENST00000614492 61 ntBASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO42Q6P3S6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 RNU1-129P-201ENST00000384064 167 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 HTR5BP-201ENST00000430851 1154 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 U1.21-201ENST00000580816 167 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AL009183.1-201ENST00000603760 355 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AC091812.2-201ENST00000619081 385 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AC055717.3-201ENST00000622967 595 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 AC092902.6-201ENST00000641783 218 ntBASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO42Q6P3S6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 AC078925.2-201ENST00000624013 1973 ntBASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 KRT8P39-201ENST00000396270 1433 ntBASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 AL603756.1-201ENST00000606511 2163 ntBASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
FBXO42Q6P3S6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
FBXO42Q6P3S6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms