Protein–RNA interactions for Protein: Q59GN2

RPL39P5, Putative 60S ribosomal protein L39-like 5, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P5Q59GN2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 HLA-J-202ENST00000469281 1241 ntBASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 OR7E14P-202ENST00000530490 1290 ntBASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 AC013467.2-201ENST00000605472 835 ntBASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P5Q59GN2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 LINC02199-201ENST00000506655 2702 ntBASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 SLC25A6P2-201ENST00000497974 877 ntBASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 AC073648.2-201ENST00000510116 352 ntBASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 AL805961.1-202ENST00000641562 540 ntBASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 AF228730.7-201ENST00000641842 219 ntBASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 AL671710.1-201ENST00000610245 2349 ntBASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P5Q59GN2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P5Q59GN2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms