Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAB11AP62491 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB11AP62491 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB11AP62491 AC092384.3-202ENST00000564646 2873 ntBASIC13.69□□□□□ -0.22
RAB11AP62491 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
RAB11AP62491 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB11AP62491 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 AL365203.3-201ENST00000609742 2057 ntBASIC13.68□□□□□ -0.22
RAB11AP62491 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 Z83836.1-201ENST00000624605 1642 ntBASIC13.68□□□□□ -0.22
RAB11AP62491 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB11AP62491 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB11AP62491 STK25P1-201ENST00000585406 838 ntBASIC13.68□□□□□ -0.22
RAB11AP62491 AC011558.1-201ENST00000623459 338 ntBASIC13.68□□□□□ -0.22
RAB11AP62491 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
RAB11AP62491 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB11AP62491 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB11AP62491 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.67□□□□□ -0.22
RAB11AP62491 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 HOMER2P1-201ENST00000455653 964 ntBASIC13.67□□□□□ -0.22
RAB11AP62491 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RAB11AP62491 FRMD8P1-201ENST00000440433 1524 ntBASIC13.67□□□□□ -0.22
RAB11AP62491 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAB11AP62491 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RAB11AP62491 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB11AP62491 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB11AP62491 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms