Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN20P56880 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN20P56880 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN20P56880 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 MRPL20P1-201ENST00000400819 433 ntBASIC15.39■□□□□ 0.05
CLDN20P56880 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 PAWRP1-201ENST00000451083 565 ntBASIC15.39■□□□□ 0.05
CLDN20P56880 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 OR7E47P-204ENST00000575924 449 ntBASIC15.39■□□□□ 0.05
CLDN20P56880 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN20P56880 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN20P56880 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 AC060834.1-201ENST00000443027 2032 ntBASIC15.39■□□□□ 0.05
CLDN20P56880 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN20P56880 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 AC006449.5-201ENST00000610658 2098 ntBASIC15.39■□□□□ 0.05
CLDN20P56880 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CLDN20P56880 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CLDN20P56880 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 CRYGEP-201ENST00000412192 528 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.38■□□□□ 0.05
CLDN20P56880 PRSS29P-201ENST00000440800 595 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 VN2R19P-201ENST00000442399 1052 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 KRT18P3-201ENST00000451602 1288 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.38■□□□□ 0.05
CLDN20P56880 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.38■□□□□ 0.05
CLDN20P56880 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.38■□□□□ 0.05
CLDN20P56880 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.38■□□□□ 0.05
CLDN20P56880 AC064836.3-201ENST00000607928 673 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 FAM197Y3-203ENST00000618346 717 ntBASIC15.38■□□□□ 0.05
CLDN20P56880 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLDN20P56880 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN20P56880 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN20P56880 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN20P56880 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN20P56880 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDN20P56880 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN20P56880 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN20P56880 AC005052.1-201ENST00000625181 2492 ntBASIC15.37■□□□□ 0.05
CLDN20P56880 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDN20P56880 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CLDN20P56880 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLDN20P56880 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms