Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.77□□□□□ -0.05
THBS4P35443 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
THBS4P35443 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
THBS4P35443 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
THBS4P35443 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 VN2R19P-201ENST00000442399 1052 ntBASIC14.76□□□□□ -0.05
THBS4P35443 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.76□□□□□ -0.05
THBS4P35443 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 AC064836.3-201ENST00000607928 673 ntBASIC14.76□□□□□ -0.05
THBS4P35443 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
THBS4P35443 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
THBS4P35443 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
THBS4P35443 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
THBS4P35443 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
THBS4P35443 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.75□□□□□ -0.05
THBS4P35443 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
THBS4P35443 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.75□□□□□ -0.05
THBS4P35443 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
THBS4P35443 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
THBS4P35443 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.75□□□□□ -0.05
THBS4P35443 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 PRSS29P-201ENST00000440800 595 ntBASIC14.75□□□□□ -0.05
THBS4P35443 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.75□□□□□ -0.05
THBS4P35443 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.75□□□□□ -0.05
THBS4P35443 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.75□□□□□ -0.05
THBS4P35443 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.75□□□□□ -0.05
THBS4P35443 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
THBS4P35443 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms