Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSP1P33241 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LSP1P33241 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSP1P33241 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LSP1P33241 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LSP1P33241 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSP1P33241 AL359258.3-201ENST00000622910 2331 ntBASIC16.85■□□□□ 0.29
LSP1P33241 AC136621.1-201ENST00000624017 2304 ntBASIC16.85■□□□□ 0.29
LSP1P33241 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LSP1P33241 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.85■□□□□ 0.29
LSP1P33241 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.84■□□□□ 0.29
LSP1P33241 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LSP1P33241 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.84■□□□□ 0.29
LSP1P33241 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 AC093827.2-201ENST00000512654 315 ntBASIC16.84■□□□□ 0.29
LSP1P33241 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.84■□□□□ 0.29
LSP1P33241 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 AC116562.4-202ENST00000641738 218 ntBASIC16.84■□□□□ 0.29
LSP1P33241 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 AC097637.2-201ENST00000624096 1997 ntBASIC16.84■□□□□ 0.29
LSP1P33241 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LSP1P33241 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSP1P33241 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LSP1P33241 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LSP1P33241 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LSP1P33241 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LSP1P33241 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LSP1P33241 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LSP1P33241 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.83■□□□□ 0.28
LSP1P33241 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.83■□□□□ 0.28
LSP1P33241 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 AC068472.1-201ENST00000474589 881 ntBASIC16.83■□□□□ 0.28
LSP1P33241 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSP1P33241 AL109954.1-202ENST00000564051 2148 ntBASIC16.83■□□□□ 0.28
LSP1P33241 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 AC233702.5-201ENST00000584107 538 ntBASIC16.83■□□□□ 0.28
LSP1P33241 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
LSP1P33241 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.83■□□□□ 0.28
LSP1P33241 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.83■□□□□ 0.28
LSP1P33241 AL139011.1-202ENST00000642063 584 ntBASIC16.83■□□□□ 0.28
LSP1P33241 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.83■□□□□ 0.28
LSP1P33241 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms