Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ACKR3P25106 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
ACKR3P25106 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ACKR3P25106 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.6□□□□□ -0.07
ACKR3P25106 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ACKR3P25106 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 AL662844.4-201ENST00000606367 2838 ntBASIC14.59□□□□□ -0.07
ACKR3P25106 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.59□□□□□ -0.07
ACKR3P25106 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 PTCHD3P3-201ENST00000403073 906 ntBASIC14.59□□□□□ -0.07
ACKR3P25106 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ACKR3P25106 ELK2BP-201ENST00000415014 1224 ntBASIC14.59□□□□□ -0.07
ACKR3P25106 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.59□□□□□ -0.07
ACKR3P25106 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.59□□□□□ -0.07
ACKR3P25106 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.59□□□□□ -0.07
ACKR3P25106 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ACKR3P25106 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
ACKR3P25106 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.58□□□□□ -0.07
ACKR3P25106 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.58□□□□□ -0.07
ACKR3P25106 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ACKR3P25106 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ACKR3P25106 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
ACKR3P25106 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ACKR3P25106 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ACKR3P25106 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ACKR3P25106 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
ACKR3P25106 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ACKR3P25106 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.58□□□□□ -0.08
ACKR3P25106 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.58□□□□□ -0.08
ACKR3P25106 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.58□□□□□ -0.08
ACKR3P25106 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.58□□□□□ -0.08
ACKR3P25106 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.58□□□□□ -0.08
ACKR3P25106 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.58□□□□□ -0.08
ACKR3P25106 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.58□□□□□ -0.08
ACKR3P25106 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ACKR3P25106 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.58□□□□□ -0.08
ACKR3P25106 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
ACKR3P25106 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACKR3P25106 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.58□□□□□ -0.08
ACKR3P25106 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms