Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCND1P24385 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCND1P24385 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCND1P24385 PKD1P5-201ENST00000532415 10291 ntBASIC16.93■□□□□ 0.3
CCND1P24385 AC046185.3-201ENST00000623228 1824 ntBASIC16.93■□□□□ 0.3
CCND1P24385 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCND1P24385 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCND1P24385 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCND1P24385 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCND1P24385 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.92■□□□□ 0.3
CCND1P24385 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCND1P24385 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCND1P24385 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.92■□□□□ 0.3
CCND1P24385 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCND1P24385 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 KLF4P1-201ENST00000412782 1185 ntBASIC16.92■□□□□ 0.3
CCND1P24385 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 ABCD1P5-201ENST00000445663 754 ntBASIC16.92■□□□□ 0.3
CCND1P24385 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.92■□□□□ 0.3
CCND1P24385 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.92■□□□□ 0.3
CCND1P24385 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.92■□□□□ 0.3
CCND1P24385 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.92■□□□□ 0.3
CCND1P24385 AC073592.5-201ENST00000624854 528 ntBASIC16.92■□□□□ 0.3
CCND1P24385 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.92■□□□□ 0.3
CCND1P24385 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 PMPCAP1-201ENST00000508114 1576 ntBASIC16.92■□□□□ 0.3
CCND1P24385 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCND1P24385 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCND1P24385 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
CCND1P24385 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCND1P24385 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCND1P24385 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.91■□□□□ 0.3
CCND1P24385 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.91■□□□□ 0.3
CCND1P24385 LINC01711-201ENST00000598340 967 ntBASIC16.91■□□□□ 0.3
CCND1P24385 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.91■□□□□ 0.3
CCND1P24385 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 AP000867.4-201ENST00000641616 219 ntBASIC16.91■□□□□ 0.3
CCND1P24385 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CCND1P24385 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.91■□□□□ 0.3
CCND1P24385 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCND1P24385 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCND1P24385 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCND1P24385 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCND1P24385 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCND1P24385 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCND1P24385 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.9■□□□□ 0.3
CCND1P24385 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms