Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B1P20020 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B1P20020 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.34■□□□□ 0.69
ATP2B1P20020 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ATP2B1P20020 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ATP2B1P20020 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B1P20020 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B1P20020 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B1P20020 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B1P20020 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B1P20020 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B1P20020 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B1P20020 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B1P20020 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B1P20020 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B1P20020 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B1P20020 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ATP2B1P20020 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B1P20020 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
ATP2B1P20020 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2B1P20020 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B1P20020 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B1P20020 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B1P20020 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
ATP2B1P20020 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B1P20020 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2B1P20020 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2B1P20020 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B1P20020 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ATP2B1P20020 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B1P20020 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B1P20020 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
ATP2B1P20020 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2B1P20020 AC098831.1-202ENST00000438821 336 ntBASIC19.33■□□□□ 0.68
ATP2B1P20020 RNA5SP419-201ENST00000515908 135 ntBASIC19.33■□□□□ 0.68
ATP2B1P20020 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B1P20020 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2B1P20020 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B1P20020 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B1P20020 AC008667.4-201ENST00000607370 168 ntBASIC19.33■□□□□ 0.68
ATP2B1P20020 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2B1P20020 AC004790.2-201ENST00000623588 572 ntBASIC19.33■□□□□ 0.68
ATP2B1P20020 AF228730.7-201ENST00000641842 219 ntBASIC19.33■□□□□ 0.68
ATP2B1P20020 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B1P20020 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2B1P20020 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B1P20020 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B1P20020 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B1P20020 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B1P20020 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B1P20020 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 IGHV3-65-201ENST00000523210 341 ntBASIC19.32■□□□□ 0.68
ATP2B1P20020 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.32■□□□□ 0.68
ATP2B1P20020 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B1P20020 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B1P20020 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.32■□□□□ 0.68
ATP2B1P20020 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATP2B1P20020 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B1P20020 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B1P20020 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2B1P20020 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B1P20020 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B1P20020 HLA-A-201ENST00000376802 1334 ntBASIC19.31■□□□□ 0.68
ATP2B1P20020 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms