Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 AC006277.1-201ENST00000624348 1610 ntBASIC18.16■□□□□ 0.5
CCDC172P0C7W6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 KRT18P31-201ENST00000506277 1292 ntBASIC18.16■□□□□ 0.5
CCDC172P0C7W6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 AL732292.2-201ENST00000609649 430 ntBASIC18.16■□□□□ 0.5
CCDC172P0C7W6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 AF228730.7-201ENST00000641842 219 ntBASIC18.16■□□□□ 0.5
CCDC172P0C7W6 AC092171.3-201ENST00000610122 2651 ntBASIC18.16■□□□□ 0.5
CCDC172P0C7W6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC172P0C7W6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 AC008741.2-201ENST00000612792 3115 ntBASIC18.15■□□□□ 0.5
CCDC172P0C7W6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 HCG4P8-203ENST00000443049 980 ntBASIC18.15■□□□□ 0.5
CCDC172P0C7W6 AC091304.2-201ENST00000564639 760 ntBASIC18.15■□□□□ 0.5
CCDC172P0C7W6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC172P0C7W6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC172P0C7W6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC172P0C7W6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CCDC172P0C7W6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC172P0C7W6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC172P0C7W6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.14■□□□□ 0.5
CCDC172P0C7W6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms