Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 AL845331.1-201ENST00000424978 1190 ntBASIC16.26■□□□□ 0.19
LINGO3P0C6S8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 NPAP1P7-201ENST00000613027 823 ntBASIC16.26■□□□□ 0.19
LINGO3P0C6S8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINGO3P0C6S8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.25■□□□□ 0.19
LINGO3P0C6S8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 UPK3BP1-201ENST00000428678 509 ntBASIC16.24■□□□□ 0.19
LINGO3P0C6S8 ATP5G2P1-201ENST00000433580 426 ntBASIC16.24■□□□□ 0.19
LINGO3P0C6S8 DRAXINP1-201ENST00000437611 948 ntBASIC16.24■□□□□ 0.19
LINGO3P0C6S8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 AP002414.4-201ENST00000589764 1148 ntBASIC16.24■□□□□ 0.19
LINGO3P0C6S8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms