Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP2P08253 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP2P08253 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP2P08253 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 PMS2P7-201ENST00000506558 1336 ntBASIC16.8■□□□□ 0.28
MMP2P08253 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP2P08253 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP2P08253 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP2P08253 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP2P08253 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP2P08253 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP2P08253 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP2P08253 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MMP2P08253 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP2P08253 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
MMP2P08253 AL662844.4-201ENST00000606367 2838 ntBASIC16.79■□□□□ 0.28
MMP2P08253 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP2P08253 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
MMP2P08253 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MMP2P08253 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP2P08253 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MMP2P08253 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.79■□□□□ 0.28
MMP2P08253 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.79■□□□□ 0.28
MMP2P08253 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.79■□□□□ 0.28
MMP2P08253 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 AC099522.2-201ENST00000607001 744 ntBASIC16.79■□□□□ 0.28
MMP2P08253 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
MMP2P08253 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 PCGF3-213ENST00000620529 1899 ntBASIC16.79■□□□□ 0.28
MMP2P08253 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP2P08253 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP2P08253 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MMP2P08253 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP2P08253 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP2P08253 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP2P08253 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP2P08253 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 MCCD1P2-201ENST00000423228 335 ntBASIC16.78■□□□□ 0.28
MMP2P08253 AC004832.2-201ENST00000426397 482 ntBASIC16.78■□□□□ 0.28
MMP2P08253 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.78■□□□□ 0.28
MMP2P08253 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.78■□□□□ 0.28
MMP2P08253 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.78■□□□□ 0.28
MMP2P08253 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP2P08253 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP2P08253 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
MMP2P08253 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP2P08253 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 AC092364.2-201ENST00000596710 2692 ntBASIC16.78■□□□□ 0.28
MMP2P08253 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP2P08253 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP2P08253 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MMP2P08253 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP2P08253 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP2P08253 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms