Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PPP1R3DO95685 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PPP1R3DO95685 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.18■□□□□ 0.02
PPP1R3DO95685 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.18■□□□□ 0.02
PPP1R3DO95685 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 AC106795.1-205ENST00000512851 1056 ntBASIC15.17■□□□□ 0.02
PPP1R3DO95685 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.17■□□□□ 0.02
PPP1R3DO95685 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PPP1R3DO95685 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.17■□□□□ 0.02
PPP1R3DO95685 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 AL356309.3-201ENST00000624132 1934 ntBASIC15.16■□□□□ 0.02
PPP1R3DO95685 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 AL139424.1-201ENST00000607572 797 ntBASIC15.16■□□□□ 0.02
PPP1R3DO95685 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 AL139288.1-201ENST00000623748 933 ntBASIC15.16■□□□□ 0.02
PPP1R3DO95685 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.16■□□□□ 0.02
PPP1R3DO95685 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PPP1R3DO95685 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms