Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBFD1O14562 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 PI4KAP1-204ENST00000612579 1703 ntBASIC16.26■□□□□ 0.19
UBFD1O14562 AC131009.4-201ENST00000624048 1740 ntBASIC16.26■□□□□ 0.19
UBFD1O14562 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBFD1O14562 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 TSPY19P-201ENST00000418461 509 ntBASIC16.26■□□□□ 0.19
UBFD1O14562 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.26■□□□□ 0.19
UBFD1O14562 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.26■□□□□ 0.19
UBFD1O14562 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.26■□□□□ 0.19
UBFD1O14562 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 TSPY18P-201ENST00000441642 509 ntBASIC16.26■□□□□ 0.19
UBFD1O14562 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.26■□□□□ 0.19
UBFD1O14562 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.26■□□□□ 0.19
UBFD1O14562 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.26■□□□□ 0.19
UBFD1O14562 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.26■□□□□ 0.19
UBFD1O14562 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 AC025062.2-201ENST00000605477 670 ntBASIC16.26■□□□□ 0.19
UBFD1O14562 AC008608.2-201ENST00000606089 416 ntBASIC16.26■□□□□ 0.19
UBFD1O14562 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
UBFD1O14562 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.26■□□□□ 0.19
UBFD1O14562 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
UBFD1O14562 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
UBFD1O14562 AC010491.1-201ENST00000563101 2797 ntBASIC16.26■□□□□ 0.19
UBFD1O14562 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UBFD1O14562 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.25■□□□□ 0.19
UBFD1O14562 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 ELK2BP-201ENST00000415014 1224 ntBASIC16.25■□□□□ 0.19
UBFD1O14562 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.25■□□□□ 0.19
UBFD1O14562 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.25■□□□□ 0.19
UBFD1O14562 AC107918.2-201ENST00000530817 355 ntBASIC16.25■□□□□ 0.19
UBFD1O14562 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.25■□□□□ 0.19
UBFD1O14562 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.25■□□□□ 0.19
UBFD1O14562 MIR3652-201ENST00000579335 131 ntBASIC16.25■□□□□ 0.19
UBFD1O14562 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.25■□□□□ 0.19
UBFD1O14562 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.25■□□□□ 0.19
UBFD1O14562 AF228730.7-201ENST00000641842 219 ntBASIC16.25■□□□□ 0.19
UBFD1O14562 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
UBFD1O14562 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.25■□□□□ 0.19
UBFD1O14562 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UBFD1O14562 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.25■□□□□ 0.19
UBFD1O14562 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
UBFD1O14562 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBFD1O14562 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UBFD1O14562 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
UBFD1O14562 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.25■□□□□ 0.19
UBFD1O14562 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.24■□□□□ 0.19
UBFD1O14562 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.24■□□□□ 0.19
UBFD1O14562 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.24■□□□□ 0.19
UBFD1O14562 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms