Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AL596087.1-201ENST00000400979 1969 ntBASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 Z83836.1-201ENST00000624605 1642 ntBASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 AL390719.2-201ENST00000606993 987 ntBASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 AC073912.3-201ENST00000624414 853 ntBASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 STARP1-201ENST00000397973 869 ntBASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MEIS3P1A6NDR6 KRT18P22-201ENST00000402024 1347 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms