Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 AC092364.2-202ENST00000597012 1073 ntBASIC18.82■□□□□ 0.6
COL20A1Q9P218 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.82■□□□□ 0.6
COL20A1Q9P218 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 AC078925.2-201ENST00000624013 1973 ntBASIC18.81■□□□□ 0.6
COL20A1Q9P218 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL20A1Q9P218 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 UGT1A2P-201ENST00000454886 866 ntBASIC18.81■□□□□ 0.6
COL20A1Q9P218 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 AC097493.3-201ENST00000509725 367 ntBASIC18.81■□□□□ 0.6
COL20A1Q9P218 AP002490.2-201ENST00000524791 560 ntBASIC18.81■□□□□ 0.6
COL20A1Q9P218 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 AC018529.1-201ENST00000613063 361 ntBASIC18.81■□□□□ 0.6
COL20A1Q9P218 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL20A1Q9P218 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL20A1Q9P218 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL20A1Q9P218 AC080080.1-201ENST00000625121 2420 ntBASIC18.81■□□□□ 0.6
COL20A1Q9P218 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL20A1Q9P218 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL20A1Q9P218 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL20A1Q9P218 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL20A1Q9P218 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 MIR661-201ENST00000384842 89 ntBASIC18.79■□□□□ 0.6
COL20A1Q9P218 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 SPTSSB-204ENST00000617024 1292 ntBASIC18.79■□□□□ 0.6
COL20A1Q9P218 AL390754.1-201ENST00000619088 582 ntBASIC18.79■□□□□ 0.6
COL20A1Q9P218 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms