Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 AC021097.1-201ENST00000607902 574 ntBASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 GGT3P-204ENST00000453783 1664 ntBASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 MCCD1P2-201ENST00000423228 335 ntBASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 AC092474.2-201ENST00000424288 719 ntBASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 GPAA1P2-202ENST00000606848 1787 ntBASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
ECHDC1Q9NTX5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC1Q9NTX5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms