Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 AL021920.2-201ENST00000624828 1351 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 TERF1P1-201ENST00000311003 1181 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 AL137013.1-201ENST00000432946 1228 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 SLC25A3P1-201ENST00000443844 931 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 GUSBP12-201ENST00000513727 720 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 AL139011.1-202ENST00000642063 584 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 AC024909.3-201ENST00000611513 2257 ntBASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RAB3IL1Q8TBN0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 AL445228.2-201ENST00000605589 952 ntBASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IL1Q8TBN0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IL1Q8TBN0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms