Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 KRT18P28-201ENST00000453838 1332 ntBASIC19.86■□□□□ 0.77
CTR9Q6PD62 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.86■□□□□ 0.77
CTR9Q6PD62 AC004835.2-201ENST00000603762 682 ntBASIC19.86■□□□□ 0.77
CTR9Q6PD62 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 AC005915.1-201ENST00000624912 2018 ntBASIC19.85■□□□□ 0.77
CTR9Q6PD62 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTR9Q6PD62 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 WASH6P-202ENST00000359512 1437 ntBASIC19.85■□□□□ 0.77
CTR9Q6PD62 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CTR9Q6PD62 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 AL139400.1-201ENST00000366220 510 ntBASIC19.84■□□□□ 0.77
CTR9Q6PD62 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 PMS2P2-201ENST00000425039 1128 ntBASIC19.84■□□□□ 0.77
CTR9Q6PD62 SPCS2P4-201ENST00000436160 681 ntBASIC19.84■□□□□ 0.77
CTR9Q6PD62 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 RN7SL589P-201ENST00000481268 310 ntBASIC19.84■□□□□ 0.77
CTR9Q6PD62 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 LINC01225-203ENST00000563550 1244 ntBASIC19.84■□□□□ 0.77
CTR9Q6PD62 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 AC105020.1-201ENST00000435356 2205 ntBASIC19.84■□□□□ 0.77
CTR9Q6PD62 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 AC016027.1-202ENST00000607927 1699 ntBASIC19.84■□□□□ 0.77
CTR9Q6PD62 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.84■□□□□ 0.77
CTR9Q6PD62 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTR9Q6PD62 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms