Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 AL049757.1-201ENST00000616842 1596 ntBASIC15.59■□□□□ 0.09
PER3P56645 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 FAM58CP-201ENST00000435741 640 ntBASIC15.59■□□□□ 0.09
PER3P56645 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.59■□□□□ 0.09
PER3P56645 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.59■□□□□ 0.09
PER3P56645 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.59■□□□□ 0.09
PER3P56645 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.59■□□□□ 0.09
PER3P56645 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.59■□□□□ 0.09
PER3P56645 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.59■□□□□ 0.09
PER3P56645 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PER3P56645 AC004790.2-201ENST00000623588 572 ntBASIC15.59■□□□□ 0.09
PER3P56645 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.59■□□□□ 0.09
PER3P56645 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 BCAR1-209ENST00000546196 1340 ntBASIC15.59■□□□□ 0.09
PER3P56645 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
PER3P56645 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.59■□□□□ 0.09
PER3P56645 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PER3P56645 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.59■□□□□ 0.09
PER3P56645 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.59■□□□□ 0.09
PER3P56645 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PER3P56645 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.58■□□□□ 0.09
PER3P56645 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PER3P56645 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
PER3P56645 FLJ13224-201ENST00000313737 1514 ntBASIC15.58■□□□□ 0.09
PER3P56645 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
PER3P56645 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.58■□□□□ 0.09
PER3P56645 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PER3P56645 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PER3P56645 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
PER3P56645 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PER3P56645 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
PER3P56645 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PER3P56645 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
PER3P56645 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.58■□□□□ 0.08
PER3P56645 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 AC096734.2-201ENST00000562054 433 ntBASIC15.58■□□□□ 0.08
PER3P56645 AC027612.4-201ENST00000605371 583 ntBASIC15.58■□□□□ 0.08
PER3P56645 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 AL805961.1-202ENST00000641562 540 ntBASIC15.58■□□□□ 0.08
PER3P56645 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.58■□□□□ 0.08
PER3P56645 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PER3P56645 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PER3P56645 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
PER3P56645 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms