Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATN1P54259 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ATN1P54259 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ATN1P54259 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC18.37■□□□□ 0.53
ATN1P54259 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.37■□□□□ 0.53
ATN1P54259 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.37■□□□□ 0.53
ATN1P54259 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.37■□□□□ 0.53
ATN1P54259 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC18.37■□□□□ 0.53
ATN1P54259 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.37■□□□□ 0.53
ATN1P54259 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.37■□□□□ 0.53
ATN1P54259 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ATN1P54259 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATN1P54259 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.37■□□□□ 0.53
ATN1P54259 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.37■□□□□ 0.53
ATN1P54259 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 AL355312.1-201ENST00000407115 2176 ntBASIC18.37■□□□□ 0.53
ATN1P54259 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
ATN1P54259 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ATN1P54259 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATN1P54259 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.36■□□□□ 0.53
ATN1P54259 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.36■□□□□ 0.53
ATN1P54259 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.36■□□□□ 0.53
ATN1P54259 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.36■□□□□ 0.53
ATN1P54259 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.36■□□□□ 0.53
ATN1P54259 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC18.36■□□□□ 0.53
ATN1P54259 MIR4525-201ENST00000580000 75 ntBASIC18.36■□□□□ 0.53
ATN1P54259 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATN1P54259 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATN1P54259 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ATN1P54259 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
ATN1P54259 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.35■□□□□ 0.53
ATN1P54259 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 AC073439.1-201ENST00000624121 1774 ntBASIC18.35■□□□□ 0.53
ATN1P54259 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATN1P54259 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 SLC7A15P-201ENST00000424028 1363 ntBASIC18.35■□□□□ 0.53
ATN1P54259 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.35■□□□□ 0.53
ATN1P54259 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.35■□□□□ 0.53
ATN1P54259 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATN1P54259 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC18.35■□□□□ 0.53
ATN1P54259 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.35■□□□□ 0.53
ATN1P54259 TMEM14DP-201ENST00000422205 345 ntBASIC18.35■□□□□ 0.53
ATN1P54259 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC18.35■□□□□ 0.53
ATN1P54259 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 AL512361.1-201ENST00000554200 418 ntBASIC18.35■□□□□ 0.53
ATN1P54259 AC020910.4-201ENST00000612269 540 ntBASIC18.35■□□□□ 0.53
ATN1P54259 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.35■□□□□ 0.53
ATN1P54259 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.35■□□□□ 0.53
ATN1P54259 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATN1P54259 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms