Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.9■□□□□ 0.46
SSR1P43307 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.9■□□□□ 0.46
SSR1P43307 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SSR1P43307 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SSR1P43307 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SSR1P43307 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SSR1P43307 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.89■□□□□ 0.45
SSR1P43307 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.89■□□□□ 0.45
SSR1P43307 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
SSR1P43307 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.89■□□□□ 0.45
SSR1P43307 NKAPP1-205ENST00000585790 367 ntBASIC17.89■□□□□ 0.45
SSR1P43307 AC064862.7-201ENST00000604520 867 ntBASIC17.89■□□□□ 0.45
SSR1P43307 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 TUBB8P12-201ENST00000308911 1335 ntBASIC17.89■□□□□ 0.45
SSR1P43307 TUBB7P-202ENST00000428444 1305 ntBASIC17.89■□□□□ 0.45
SSR1P43307 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 TUBB8P7-204ENST00000567960 1332 ntBASIC17.89■□□□□ 0.45
SSR1P43307 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 PCDHB19P-201ENST00000570871 2371 ntBASIC17.89■□□□□ 0.45
SSR1P43307 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.89■□□□□ 0.45
SSR1P43307 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.89■□□□□ 0.45
SSR1P43307 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSR1P43307 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SSR1P43307 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
SSR1P43307 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SSR1P43307 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 KRT18P31-201ENST00000506277 1292 ntBASIC17.88■□□□□ 0.45
SSR1P43307 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.88■□□□□ 0.45
SSR1P43307 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.88■□□□□ 0.45
SSR1P43307 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.88■□□□□ 0.45
SSR1P43307 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.88■□□□□ 0.45
SSR1P43307 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 AC091304.2-201ENST00000564639 760 ntBASIC17.88■□□□□ 0.45
SSR1P43307 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.88■□□□□ 0.45
SSR1P43307 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.88■□□□□ 0.45
SSR1P43307 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.88■□□□□ 0.45
SSR1P43307 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.88■□□□□ 0.45
SSR1P43307 AC073592.4-201ENST00000623827 446 ntBASIC17.88■□□□□ 0.45
SSR1P43307 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.88■□□□□ 0.45
SSR1P43307 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.88■□□□□ 0.45
SSR1P43307 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms