Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.63■□□□□ 0.41
RARAP10276 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RARAP10276 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RARAP10276 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RARAP10276 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.62■□□□□ 0.41
RARAP10276 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.62■□□□□ 0.41
RARAP10276 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.62■□□□□ 0.41
RARAP10276 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.62■□□□□ 0.41
RARAP10276 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RARAP10276 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 AC002310.6-201ENST00000624451 1377 ntBASIC17.62■□□□□ 0.41
RARAP10276 AC005052.1-201ENST00000625181 2492 ntBASIC17.62■□□□□ 0.41
RARAP10276 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.62■□□□□ 0.41
RARAP10276 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.62■□□□□ 0.41
RARAP10276 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RARAP10276 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.62■□□□□ 0.41
RARAP10276 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.61■□□□□ 0.41
RARAP10276 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RARAP10276 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.61■□□□□ 0.41
RARAP10276 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 AL450487.1-201ENST00000426799 995 ntBASIC17.61■□□□□ 0.41
RARAP10276 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.61■□□□□ 0.41
RARAP10276 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 RPS15P9-201ENST00000494093 319 ntBASIC17.61■□□□□ 0.41
RARAP10276 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RARAP10276 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RARAP10276 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.61■□□□□ 0.41
RARAP10276 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.61■□□□□ 0.41
RARAP10276 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.61■□□□□ 0.41
RARAP10276 AC148477.8-201ENST00000624298 468 ntBASIC17.61■□□□□ 0.41
RARAP10276 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.61■□□□□ 0.41
RARAP10276 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 TOP3BP1-201ENST00000420768 1380 ntBASIC17.61■□□□□ 0.41
RARAP10276 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.61■□□□□ 0.41
RARAP10276 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 AC006538.1-201ENST00000567905 1585 ntBASIC17.61■□□□□ 0.41
RARAP10276 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RARAP10276 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.61■□□□□ 0.41
RARAP10276 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms