Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFAP04085 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFAP04085 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFAP04085 AC005237.2-201ENST00000434368 219 ntBASIC15.73■□□□□ 0.11
PDGFAP04085 AC087163.2-201ENST00000457299 853 ntBASIC15.73■□□□□ 0.11
PDGFAP04085 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFAP04085 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFAP04085 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFAP04085 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFAP04085 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFAP04085 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFAP04085 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.73■□□□□ 0.11
PDGFAP04085 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PDGFAP04085 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFAP04085 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PDGFAP04085 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 LINC00554-201ENST00000564841 3011 ntBASIC15.72■□□□□ 0.11
PDGFAP04085 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFAP04085 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PDGFAP04085 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 FAM58DP-201ENST00000428076 619 ntBASIC15.72■□□□□ 0.11
PDGFAP04085 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFAP04085 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 AJ011932.1-201ENST00000621707 465 ntBASIC15.72■□□□□ 0.11
PDGFAP04085 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PDGFAP04085 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFAP04085 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFAP04085 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDGFAP04085 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 UBALD1-205ENST00000590891 2641 ntBASIC15.71■□□□□ 0.11
PDGFAP04085 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.71■□□□□ 0.11
PDGFAP04085 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms