Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 STK19B-204ENST00000512515 211 ntBASIC14.92□□□□□ -0.02
GMDSO60547 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.92□□□□□ -0.02
GMDSO60547 PRELID1P1-202ENST00000567272 903 ntBASIC14.92□□□□□ -0.02
GMDSO60547 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.92□□□□□ -0.02
GMDSO60547 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
GMDSO60547 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.92□□□□□ -0.02
GMDSO60547 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GMDSO60547 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.92□□□□□ -0.02
GMDSO60547 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.92□□□□□ -0.02
GMDSO60547 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GMDSO60547 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GMDSO60547 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.92□□□□□ -0.02
GMDSO60547 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
GMDSO60547 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GMDSO60547 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GMDSO60547 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.92□□□□□ -0.02
GMDSO60547 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.92□□□□□ -0.02
GMDSO60547 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GMDSO60547 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 AC092364.2-201ENST00000596710 2692 ntBASIC14.91□□□□□ -0.02
GMDSO60547 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.91□□□□□ -0.02
GMDSO60547 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
GMDSO60547 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.91□□□□□ -0.02
GMDSO60547 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.91□□□□□ -0.02
GMDSO60547 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.91□□□□□ -0.02
GMDSO60547 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.91□□□□□ -0.02
GMDSO60547 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.91□□□□□ -0.02
GMDSO60547 LINC01711-201ENST00000598340 967 ntBASIC14.91□□□□□ -0.02
GMDSO60547 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.91□□□□□ -0.02
GMDSO60547 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GMDSO60547 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GMDSO60547 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.91□□□□□ -0.02
GMDSO60547 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GMDSO60547 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GMDSO60547 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.9□□□□□ -0.02
GMDSO60547 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GMDSO60547 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 AC009336.1-201ENST00000608941 1553 ntBASIC14.9□□□□□ -0.02
GMDSO60547 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.9□□□□□ -0.02
GMDSO60547 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.9□□□□□ -0.02
GMDSO60547 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
GMDSO60547 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.9□□□□□ -0.02
GMDSO60547 ABCD1P5-201ENST00000445663 754 ntBASIC14.9□□□□□ -0.02
GMDSO60547 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.9□□□□□ -0.02
GMDSO60547 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.9□□□□□ -0.02
GMDSO60547 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.9□□□□□ -0.02
GMDSO60547 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 AC073592.5-201ENST00000624854 528 ntBASIC14.9□□□□□ -0.02
GMDSO60547 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.9□□□□□ -0.02
GMDSO60547 AP000867.4-201ENST00000641616 219 ntBASIC14.9□□□□□ -0.02
GMDSO60547 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GMDSO60547 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms