Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 Z83851.2-201ENST00000609564 659 ntBASIC17.43■□□□□ 0.38
SRRM3A6NNA2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 BX276092.7-203ENST00000637198 1536 ntBASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AL645939.2-201ENST00000427340 991 ntBASIC17.42■□□□□ 0.38
SRRM3A6NNA2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AC002347.1-201ENST00000569543 541 ntBASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 AL136379.1-201ENST00000623471 2642 ntBASIC17.42■□□□□ 0.38
SRRM3A6NNA2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM3A6NNA2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 IGHGP-201ENST00000390555 1178 ntBASIC17.41■□□□□ 0.38
SRRM3A6NNA2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 RNA5SP416-201ENST00000516838 111 ntBASIC17.41■□□□□ 0.38
SRRM3A6NNA2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 HLA-A-202ENST00000376806 1854 ntBASIC17.41■□□□□ 0.38
SRRM3A6NNA2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SRRM3A6NNA2 AC068418.2-201ENST00000577309 3703 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms