Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 UNC93B7-201ENST00000509439 705 ntBASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 OR7E14P-202ENST00000530490 1290 ntBASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 AL805961.1-202ENST00000641562 540 ntBASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 SERPINA7P1-201ENST00000443077 631 ntBASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 NIFKP4-201ENST00000567275 1192 ntBASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 AC092171.3-201ENST00000610122 2651 ntBASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA11Q9Y5H2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 AC006504.4-201ENST00000592118 1568 ntBASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 ELK2BP-201ENST00000415014 1224 ntBASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 RNPS1P1-201ENST00000507437 918 ntBASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 AL121912.1-201ENST00000603683 238 ntBASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 GGTLC5P-201ENST00000617623 998 ntBASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms