Protein–RNA interactions for Protein: Q8N4B1

FAM109A, Sesquipedalian-1, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM109AQ8N4B1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 AC023274.1-201ENST00000418278 595 ntBASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 UPF3AP3-201ENST00000420996 769 ntBASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 KRT18P2-201ENST00000447938 1258 ntBASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 AC010327.4-202ENST00000591484 748 ntBASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 LINC02199-201ENST00000506655 2702 ntBASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FAM109AQ8N4B1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 AP001094.4-201ENST00000579008 2176 ntBASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 GPX1P2-201ENST00000429271 606 ntBASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 MTDHP5-201ENST00000598980 586 ntBASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FAM109AQ8N4B1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 AC133963.1-201ENST00000504166 1679 ntBASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 LYSMD4-203ENST00000378904 2122 ntBASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 RPSAP43-201ENST00000402237 625 ntBASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FAM109AQ8N4B1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms