Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 FLJ38576-201ENST00000623820 2459 ntBASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 IGHV3-47-201ENST00000425060 335 ntBASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 AC099336.1-202ENST00000602961 463 ntBASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MRPL55Q7Z7F7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 TCAF2P1-201ENST00000291129 2421 ntBASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC10.85□□□□□ -0.67
MRPL55Q7Z7F7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms