Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC27A4Q6P1M0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SLC27A4Q6P1M0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 AC148477.5-201ENST00000625164 1645 ntBASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 TSSC2-201ENST00000450217 709 ntBASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 AP005901.3-202ENST00000581653 237 ntBASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 AL139011.1-202ENST00000642063 584 ntBASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 KRT8P49-201ENST00000604166 1432 ntBASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 INTS4P1-201ENST00000438455 1935 ntBASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC27A4Q6P1M0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 PKD1P5-201ENST00000532415 10291 ntBASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 AC068418.2-201ENST00000577309 3703 ntBASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 AC097637.2-201ENST00000624096 1997 ntBASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 PAUPAR-201ENST00000630360 2965 ntBASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 AC105917.1-201ENST00000506637 2539 ntBASIC15.32■□□□□ 0.04
SLC27A4Q6P1M0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC27A4Q6P1M0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms