Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HOXA13P31271 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXA13P31271 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXA13P31271 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXA13P31271 AL138918.1-201ENST00000568306 659 ntBASIC19.06■□□□□ 0.64
HOXA13P31271 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.06■□□□□ 0.64
HOXA13P31271 AC106028.4-201ENST00000614509 607 ntBASIC19.06■□□□□ 0.64
HOXA13P31271 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXA13P31271 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXA13P31271 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXA13P31271 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HOXA13P31271 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA13P31271 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HOXA13P31271 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 KRT18P32-201ENST00000424695 1287 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXA13P31271 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXA13P31271 HLA-J-203ENST00000494367 1087 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 RFPL4AP1-201ENST00000530883 850 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 AC004449.1-201ENST00000564240 433 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 AL355385.1-201ENST00000606123 409 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 AC021097.1-201ENST00000607902 574 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 AC009093.7-201ENST00000623853 1223 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXA13P31271 LINC00628-201ENST00000628516 1289 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXA13P31271 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXA13P31271 AC105020.1-201ENST00000435356 2205 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HOXA13P31271 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
HOXA13P31271 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 UXT-AS1-201ENST00000590504 1525 ntBASIC19.05■□□□□ 0.64
HOXA13P31271 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXA13P31271 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA13P31271 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
HOXA13P31271 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXA13P31271 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXA13P31271 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXA13P31271 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXA13P31271 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 AL645939.2-201ENST00000427340 991 ntBASIC19.04■□□□□ 0.64
HOXA13P31271 IGHV3-62-201ENST00000520057 340 ntBASIC19.04■□□□□ 0.64
HOXA13P31271 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXA13P31271 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXA13P31271 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HOXA13P31271 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXA13P31271 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA13P31271 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA13P31271 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HOXA13P31271 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HOXA13P31271 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA13P31271 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
HOXA13P31271 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA13P31271 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA13P31271 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA13P31271 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA13P31271 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA13P31271 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms