Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC43A1O75387 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC43A1O75387 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC43A1O75387 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC43A1O75387 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC43A1O75387 AC139887.3-201ENST00000568585 713 ntBASIC15.3■□□□□ 0.04
SLC43A1O75387 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC43A1O75387 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC43A1O75387 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC43A1O75387 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC43A1O75387 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC43A1O75387 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC43A1O75387 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC43A1O75387 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC43A1O75387 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 AC092068.3-201ENST00000587894 2016 ntBASIC15.29■□□□□ 0.04
SLC43A1O75387 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 EGFEM1P-202ENST00000431685 1563 ntBASIC15.29■□□□□ 0.04
SLC43A1O75387 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC43A1O75387 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC43A1O75387 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC43A1O75387 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC43A1O75387 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 AF186996.4-201ENST00000467186 377 ntBASIC15.29■□□□□ 0.04
SLC43A1O75387 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 AC021087.4-201ENST00000563761 564 ntBASIC15.29■□□□□ 0.04
SLC43A1O75387 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC43A1O75387 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC43A1O75387 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC43A1O75387 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SLC43A1O75387 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC43A1O75387 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC43A1O75387 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 AC132872.4-202ENST00000622924 2756 ntBASIC15.29■□□□□ 0.04
SLC43A1O75387 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC43A1O75387 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC43A1O75387 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC43A1O75387 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC43A1O75387 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
SLC43A1O75387 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SLC43A1O75387 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
SLC43A1O75387 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC43A1O75387 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC43A1O75387 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC43A1O75387 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC43A1O75387 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC43A1O75387 FAM197Y8-203ENST00000450145 560 ntBASIC15.28■□□□□ 0.04
SLC43A1O75387 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC43A1O75387 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 AC064862.7-201ENST00000604520 867 ntBASIC15.28■□□□□ 0.04
SLC43A1O75387 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC43A1O75387 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC43A1O75387 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC43A1O75387 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms