Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 AL031284.1-201ENST00000419297 478 ntBASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 AC108073.2-201ENST00000464002 357 ntBASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 AC092910.1-201ENST00000482027 1129 ntBASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MS4A4EQ96PG1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 SLC22A20-204ENST00000530038 1673 ntBASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 AC010654.1-201ENST00000615722 808 ntBASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 AP001350.2-201ENST00000625104 1094 ntBASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A4EQ96PG1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MS4A4EQ96PG1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms