Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 MCCD1P2-201ENST00000423228 335 ntBASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 GPX1P2-201ENST00000429271 606 ntBASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 AC007064.4-201ENST00000637740 555 ntBASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 AC116353.5-201ENST00000638148 1699 ntBASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.69■□□□□ 0.26
SH3KBP1Q96B97 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 RPSAP43-201ENST00000402237 625 ntBASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 AC010327.4-202ENST00000591484 748 ntBASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 AC079781.4-201ENST00000641908 219 ntBASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.68■□□□□ 0.26
SH3KBP1Q96B97 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms