Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 LYSMD4-203ENST00000378904 2122 ntBASIC18.13■□□□□ 0.49
HERC6Q8IVU3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 AC009477.1-201ENST00000452936 217 ntBASIC18.12■□□□□ 0.49
HERC6Q8IVU3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 AC105233.2-201ENST00000523697 349 ntBASIC18.12■□□□□ 0.49
HERC6Q8IVU3 AF228730.5-201ENST00000530288 346 ntBASIC18.12■□□□□ 0.49
HERC6Q8IVU3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC6Q8IVU3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 AP001350.2-201ENST00000625104 1094 ntBASIC18.11■□□□□ 0.49
HERC6Q8IVU3 TOP3BP1-201ENST00000420768 1380 ntBASIC18.11■□□□□ 0.49
HERC6Q8IVU3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC6Q8IVU3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.1■□□□□ 0.49
HERC6Q8IVU3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms