Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHMLP26374 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.24■□□□□ 0.83
CHMLP26374 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMLP26374 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHMLP26374 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMLP26374 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHMLP26374 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 IGLL3P-201ENST00000412472 434 ntBASIC20.23■□□□□ 0.83
CHMLP26374 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.23■□□□□ 0.83
CHMLP26374 RNA5SP415-201ENST00000517246 115 ntBASIC20.23■□□□□ 0.83
CHMLP26374 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.23■□□□□ 0.83
CHMLP26374 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMLP26374 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.23■□□□□ 0.83
CHMLP26374 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.23■□□□□ 0.83
CHMLP26374 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMLP26374 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CHMLP26374 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMLP26374 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMLP26374 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMLP26374 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.22■□□□□ 0.83
CHMLP26374 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHMLP26374 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHMLP26374 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 TPM4P1-201ENST00000436100 807 ntBASIC20.22■□□□□ 0.83
CHMLP26374 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMLP26374 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 AL662844.1-201ENST00000546340 181 ntBASIC20.22■□□□□ 0.83
CHMLP26374 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.22■□□□□ 0.83
CHMLP26374 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.22■□□□□ 0.83
CHMLP26374 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMLP26374 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMLP26374 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMLP26374 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMLP26374 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMLP26374 AC026691.1-201ENST00000602502 2017 ntBASIC20.21■□□□□ 0.83
CHMLP26374 AL391005.1-201ENST00000623953 2435 ntBASIC20.21■□□□□ 0.83
CHMLP26374 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMLP26374 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMLP26374 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.21■□□□□ 0.83
CHMLP26374 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMLP26374 VN2R19P-201ENST00000442399 1052 ntBASIC20.21■□□□□ 0.83
CHMLP26374 CXCL1P1-201ENST00000502804 216 ntBASIC20.21■□□□□ 0.83
CHMLP26374 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMLP26374 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMLP26374 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMLP26374 MIR4751-201ENST00000578027 74 ntBASIC20.21■□□□□ 0.83
CHMLP26374 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CHMLP26374 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms