Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC068137.2-201ENST00000605408 478 ntBASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-4A0A0C4DH59 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 ME2P1-201ENST00000426028 1970 ntBASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC092474.2-201ENST00000424288 719 ntBASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC099398.1-201ENST00000567919 2776 ntBASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 AP002472.1-201ENST00000577490 586 ntBASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC023274.1-201ENST00000418278 595 ntBASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-4A0A0C4DH59 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-4A0A0C4DH59 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms