Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC096582.2-201ENST00000510860 516 ntBASIC16.99■□□□□ 0.31
VPS11Q9H270 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.99■□□□□ 0.31
VPS11Q9H270 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS11Q9H270 AL121956.5-201ENST00000625261 221 ntBASIC16.99■□□□□ 0.31
VPS11Q9H270 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS11Q9H270 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS11Q9H270 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS11Q9H270 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 AC233702.3-201ENST00000578656 1387 ntBASIC16.99■□□□□ 0.31
VPS11Q9H270 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VPS11Q9H270 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.98■□□□□ 0.31
VPS11Q9H270 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 LINC00554-201ENST00000564841 3011 ntBASIC16.98■□□□□ 0.31
VPS11Q9H270 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS11Q9H270 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS11Q9H270 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VPS11Q9H270 Z69720.1-201ENST00000601483 472 ntBASIC16.98■□□□□ 0.31
VPS11Q9H270 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.98■□□□□ 0.31
VPS11Q9H270 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
VPS11Q9H270 AC006538.1-201ENST00000567905 1585 ntBASIC16.98■□□□□ 0.31
VPS11Q9H270 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS11Q9H270 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS11Q9H270 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
VPS11Q9H270 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 PAUPAR-201ENST00000630360 2965 ntBASIC16.97■□□□□ 0.31
VPS11Q9H270 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VPS11Q9H270 AC148477.5-201ENST00000625164 1645 ntBASIC16.97■□□□□ 0.31
VPS11Q9H270 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS11Q9H270 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS11Q9H270 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS11Q9H270 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.97■□□□□ 0.31
VPS11Q9H270 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS11Q9H270 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
VPS11Q9H270 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 INTS4P1-201ENST00000438455 1935 ntBASIC16.97■□□□□ 0.31
VPS11Q9H270 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS11Q9H270 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS11Q9H270 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS11Q9H270 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms