Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 AC135586.1-201ENST00000539323 574 ntBASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 AC106886.1-201ENST00000568660 600 ntBASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 INE1-201ENST00000456273 945 ntBASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AC093004.1-201ENST00000508850 424 ntBASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AC010336.2-201ENST00000564226 506 ntBASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AC104794.3-201ENST00000566840 1248 ntBASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 MIR6805-201ENST00000615055 62 ntBASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 SPTSSB-204ENST00000617024 1292 ntBASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 IGHV3-72-202ENST00000621503 303 ntBASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NECTIN4Q96NY8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 AC004840.1-201ENST00000636359 365 ntBASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 FOXO1B-201ENST00000504678 1527 ntBASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN4Q96NY8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms