Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HPS1Q92902 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.51■□□□□ 0.07
HPS1Q92902 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.5■□□□□ 0.07
HPS1Q92902 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HPS1Q92902 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.5■□□□□ 0.07
HPS1Q92902 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HPS1Q92902 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HPS1Q92902 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.5■□□□□ 0.07
HPS1Q92902 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.5■□□□□ 0.07
HPS1Q92902 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.5■□□□□ 0.07
HPS1Q92902 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.5■□□□□ 0.07
HPS1Q92902 PRELID1P1-202ENST00000567272 903 ntBASIC15.5■□□□□ 0.07
HPS1Q92902 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.5■□□□□ 0.07
HPS1Q92902 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.5■□□□□ 0.07
HPS1Q92902 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 AL121894.2-201ENST00000602977 491 ntBASIC15.5■□□□□ 0.07
HPS1Q92902 AC092119.3-201ENST00000612618 583 ntBASIC15.5■□□□□ 0.07
HPS1Q92902 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HPS1Q92902 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.5■□□□□ 0.07
HPS1Q92902 CICP4-201ENST00000447359 2812 ntBASIC15.5■□□□□ 0.07
HPS1Q92902 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.5■□□□□ 0.07
HPS1Q92902 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HPS1Q92902 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HPS1Q92902 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HPS1Q92902 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HPS1Q92902 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HPS1Q92902 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.49■□□□□ 0.07
HPS1Q92902 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 C8orf49-201ENST00000525043 1968 ntBASIC15.49■□□□□ 0.07
HPS1Q92902 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HPS1Q92902 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HPS1Q92902 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.49■□□□□ 0.07
HPS1Q92902 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
HPS1Q92902 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.49■□□□□ 0.07
HPS1Q92902 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.49■□□□□ 0.07
HPS1Q92902 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 MIR662-201ENST00000384847 95 ntBASIC15.49■□□□□ 0.07
HPS1Q92902 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.49■□□□□ 0.07
HPS1Q92902 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.49■□□□□ 0.07
HPS1Q92902 AC026396.1-201ENST00000419388 421 ntBASIC15.49■□□□□ 0.07
HPS1Q92902 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HPS1Q92902 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.49■□□□□ 0.07
HPS1Q92902 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.49■□□□□ 0.07
HPS1Q92902 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.49■□□□□ 0.07
HPS1Q92902 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HPS1Q92902 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.49■□□□□ 0.07
HPS1Q92902 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HPS1Q92902 AC016734.2-201ENST00000624325 1377 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms