Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 AL353732.1-201ENST00000569618 1459 ntBASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 AC004790.2-201ENST00000623588 572 ntBASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 AL139011.1-202ENST00000642063 584 ntBASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 AL391256.1-201ENST00000443260 1855 ntBASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 AC008894.3-201ENST00000624324 3103 ntBASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 PKD1P5-201ENST00000532415 10291 ntBASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRFBP1Q8NEF9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRFBP1Q8NEF9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRFBP1Q8NEF9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRFBP1Q8NEF9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRFBP1Q8NEF9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRFBP1Q8NEF9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.08■□□□□ 0.17
SRFBP1Q8NEF9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 FDX1P1-201ENST00000449115 551 ntBASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 IGHV3-22-201ENST00000520721 359 ntBASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 UNC93B6-202ENST00000528242 690 ntBASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 MIR4751-201ENST00000578027 74 ntBASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 MPDU1-223ENST00000582151 728 ntBASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 AC106886.4-201ENST00000623557 2502 ntBASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 AC006277.1-201ENST00000624348 1610 ntBASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SRFBP1Q8NEF9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms