Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 FZD10-202ENST00000539839 3282 ntBASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPOQ8N3V7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 PIN1P1-201ENST00000412108 996 ntBASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 AC092580.3-201ENST00000430932 139 ntBASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 AC004890.2-204ENST00000481968 304 ntBASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPOQ8N3V7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 AC139713.2-201ENST00000641328 2723 ntBASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPOQ8N3V7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPOQ8N3V7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms