Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 MRPL3P1-201ENST00000400109 1033 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 AC092910.1-201ENST00000482027 1129 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 AC098799.1-201ENST00000504752 800 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 AL049840.3-201ENST00000602669 611 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 AC008667.4-201ENST00000607370 168 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 AC005593.1-201ENST00000624894 515 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 PGM5P2-202ENST00000637225 1043 ntBASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC116Q8IYX3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CCDC116Q8IYX3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
CCDC116Q8IYX3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
CCDC116Q8IYX3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 REXO1L3P-201ENST00000622202 1288 ntBASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 AC124067.4-201ENST00000519691 2379 ntBASIC15.89■□□□□ 0.13
CCDC116Q8IYX3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 AC006277.1-201ENST00000624348 1610 ntBASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 LINC00895-201ENST00000629028 1637 ntBASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms