RNA–Protein interactions for RNA: ENST00000519840.1

AC009446.1-201, humanhuman

TSL 2 BASIC

Gene AC009446.1, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009446.1-201ENST00000519840 AEBP2Q6ZN18 517 aaPredicted RBP44.24■■■■■ 4.67
AC009446.1-201ENST00000519840 CHIC1Q5VXU3 224 aa42.66■■■■■ 4.42
AC009446.1-201ENST00000519840 SENP3Q9H4L4 574 aaPredicted RBP37.72■■■■□ 3.63
AC009446.1-201ENST00000519840 PHF23Q9BUL5 403 aaPredicted RBP37.42■■■■□ 3.58
AC009446.1-201ENST00000519840 FOXD1Q16676 465 aa35.02■■■■□ 3.2
AC009446.1-201ENST00000519840 PLPPR3Q6T4P5 718 aa34.4■■■■□ 3.1
AC009446.1-201ENST00000519840 PPP6R1Q9UPN7 881 aa33.2■■■□□ 2.91
AC009446.1-201ENST00000519840 ADRA2BP18089 450 aa33.15■■■□□ 2.9
AC009446.1-201ENST00000519840 PIAS4Q8N2W9 510 aaPredicted RBP32.91■■■□□ 2.86
AC009446.1-201ENST00000519840 MSH5O43196 834 aa32.6■■■□□ 2.81
AC009446.1-201ENST00000519840 POTEDQ86YR6 584 aa30.7■■■□□ 2.51
AC009446.1-201ENST00000519840 SCAF1Q9H7N4 1312 aaKnown RBP30.42■■■□□ 2.46
AC009446.1-201ENST00000519840 MAPK8IP2Q13387 824 aaPredicted RBP30.24■■■□□ 2.43
AC009446.1-201ENST00000519840 PPP4R3CPQ6ZMV5 832 aa30.21■■■□□ 2.43
AC009446.1-201ENST00000519840 DMRT2Q9Y5R5 561 aa29.99■■■□□ 2.39
AC009446.1-201ENST00000519840 CNKSR2Q8WXI2 1034 aa29.52■■■□□ 2.32
AC009446.1-201ENST00000519840 NCBP3Q53F19 620 aaKnown RBP29.28■■■□□ 2.28
AC009446.1-201ENST00000519840 HOXD11P31277 338 aaPredicted RBP29.13■■■□□ 2.25
AC009446.1-201ENST00000519840 RNF216Q9NWF9 866 aaPredicted RBP29.09■■■□□ 2.25
AC009446.1-201ENST00000519840 NPM3O75607 178 aaKnown RBP28.8■■■□□ 2.2
AC009446.1-201ENST00000519840 KCNA4P22459 653 aa28.8■■■□□ 2.2
AC009446.1-201ENST00000519840 DCAF8L1A6NGE4 600 aa28.72■■■□□ 2.19
AC009446.1-201ENST00000519840 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
AC009446.1-201ENST00000519840 RNF39Q9H2S5 420 aa27.84■■■□□ 2.05
AC009446.1-201ENST00000519840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.77■■■□□ 2.04
AC009446.1-201ENST00000519840 CACNB1Q02641 598 aaPredicted RBP27.56■■■□□ 2
AC009446.1-201ENST00000519840 C1QBPQ07021 282 aaKnown RBP27.5■■□□□ 1.99
AC009446.1-201ENST00000519840 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
AC009446.1-201ENST00000519840 SLC4A2P04920 1241 aa27.33■■□□□ 1.97
AC009446.1-201ENST00000519840 U3KPZ7 1027 aaPredicted RBP27.23■■□□□ 1.95
AC009446.1-201ENST00000519840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.74■■□□□ 1.87
AC009446.1-201ENST00000519840 HNRNPUL2Q1KMD3 747 aaKnown RBP26.74■■□□□ 1.87
AC009446.1-201ENST00000519840 FOXD4L1Q9NU39 408 aa26.71■■□□□ 1.87
AC009446.1-201ENST00000519840 MYCNP04198 464 aaPredicted RBP26.67■■□□□ 1.86
AC009446.1-201ENST00000519840 APLP2Q06481 763 aa26.63■■□□□ 1.85
AC009446.1-201ENST00000519840 SPINK5Q9NQ38 1064 aaPredicted RBP26.63■■□□□ 1.85
AC009446.1-201ENST00000519840 SAMD1Q6SPF0 538 aaPredicted RBP26.6■■□□□ 1.85
AC009446.1-201ENST00000519840 CAPN15O75808 1086 aa26.59■■□□□ 1.85
AC009446.1-201ENST00000519840 ZBTB22O15209 634 aa26.46■■□□□ 1.83
AC009446.1-201ENST00000519840 ZNF219Q9P2Y4 722 aaPredicted RBP26.33■■□□□ 1.81
AC009446.1-201ENST00000519840 TRHP20396 242 aaPredicted RBP26.31■■□□□ 1.8
AC009446.1-201ENST00000519840 DSG3P32926 999 aa26.28■■□□□ 1.8
AC009446.1-201ENST00000519840 ABCB7O75027 752 aa26■■□□□ 1.75
AC009446.1-201ENST00000519840 ATF5Q9Y2D1 282 aaPredicted RBP25.93■■□□□ 1.74
AC009446.1-201ENST00000519840 ATXN8OSP0DMR3 200 aa25.86■■□□□ 1.73
AC009446.1-201ENST00000519840 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
AC009446.1-201ENST00000519840 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
AC009446.1-201ENST00000519840 POLA2Q14181 598 aa25.75■■□□□ 1.71
AC009446.1-201ENST00000519840 ZBTB12Q9Y330 459 aaPredicted RBP25.33■■□□□ 1.65
AC009446.1-201ENST00000519840 RBM42Q9BTD8 480 aaKnown RBP25.12■■□□□ 1.61
AC009446.1-201ENST00000519840 FBLN2P98095 1184 aa24.96■■□□□ 1.59
AC009446.1-201ENST00000519840 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
AC009446.1-201ENST00000519840 MKRN4PQ13434 485 aaPredicted RBP24.78■■□□□ 1.56
AC009446.1-201ENST00000519840 AKT1S1Q96B36 256 aa24.65■■□□□ 1.54
AC009446.1-201ENST00000519840 SPDYE2BA6NHP3 402 aa24.57■■□□□ 1.52
AC009446.1-201ENST00000519840 SPDYE6P0CI01 402 aa24.57■■□□□ 1.52
AC009446.1-201ENST00000519840 SPDYE2Q495Y8 402 aa24.57■■□□□ 1.52
AC009446.1-201ENST00000519840 REM2Q8IYK8 340 aaPredicted RBP24.39■■□□□ 1.49
AC009446.1-201ENST00000519840 ZNF692Q9BU19 519 aaPredicted RBP24.37■■□□□ 1.49
AC009446.1-201ENST00000519840 SSUH2Q9Y2M2 353 aa24.29■■□□□ 1.48
AC009446.1-201ENST00000519840 CHRDL2Q6WN34 429 aa24.27■■□□□ 1.48
AC009446.1-201ENST00000519840 POTEHQ6S545 545 aa24.2■■□□□ 1.46
AC009446.1-201ENST00000519840 PITPNM1O00562 1244 aa24.12■■□□□ 1.45
AC009446.1-201ENST00000519840 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
AC009446.1-201ENST00000519840 SPDYE1Q8NFV5 336 aaPredicted RBP24■■□□□ 1.43
AC009446.1-201ENST00000519840 SPDYE4A6NLX3 237 aa23.97■■□□□ 1.43
AC009446.1-201ENST00000519840 CLEC11AQ9Y240 323 aa23.9■■□□□ 1.42
AC009446.1-201ENST00000519840 PIP4P2Q8N4L2 257 aa23.82■■□□□ 1.4
AC009446.1-201ENST00000519840 FXR2P51116 673 aaKnown RBP eCLIP23.79■■□□□ 1.4
AC009446.1-201ENST00000519840 PRR29P0C7W0 189 aa23.61■■□□□ 1.37
AC009446.1-201ENST00000519840 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
AC009446.1-201ENST00000519840 PRKAR2AP13861 404 aaKnown RBP23.51■■□□□ 1.35
AC009446.1-201ENST00000519840 PROM2Q8N271 834 aa23.48■■□□□ 1.35
AC009446.1-201ENST00000519840 FKBP8Q14318 412 aa23.4■■□□□ 1.34
AC009446.1-201ENST00000519840 CHADLQ6NUI6 762 aa23.35■■□□□ 1.33
AC009446.1-201ENST00000519840 HAX1O00165 279 aa23.23■■□□□ 1.31
AC009446.1-201ENST00000519840 CREBZFQ9NS37 354 aa23.14■■□□□ 1.29
AC009446.1-201ENST00000519840 FARP1Q9Y4F1 1045 aaPredicted RBP23.1■■□□□ 1.29
AC009446.1-201ENST00000519840 C19orf67A6NJJ6 358 aa23.01■■□□□ 1.27
AC009446.1-201ENST00000519840 SP7Q8TDD2 431 aaPredicted RBP22.99■■□□□ 1.27
AC009446.1-201ENST00000519840 EVX2Q03828 476 aa22.94■■□□□ 1.26
AC009446.1-201ENST00000519840 MNX1P50219 401 aaPredicted RBP22.82■■□□□ 1.24
AC009446.1-201ENST00000519840 CD44P16070 742 aaKnown RBP22.81■■□□□ 1.24
AC009446.1-201ENST00000519840 MIER1Q8N108 512 aa22.8■■□□□ 1.24
AC009446.1-201ENST00000519840 PLEKHG5O94827 1062 aa22.79■■□□□ 1.24
AC009446.1-201ENST00000519840 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
AC009446.1-201ENST00000519840 FBXO3Q9UK99 471 aa22.79■■□□□ 1.24
AC009446.1-201ENST00000519840 PLCD3Q8N3E9 789 aa22.71■■□□□ 1.23
AC009446.1-201ENST00000519840 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.21
AC009446.1-201ENST00000519840 ZRANB1Q9UGI0 708 aa22.58■■□□□ 1.21
AC009446.1-201ENST00000519840 ZBTB47Q9UFB7 747 aaPredicted RBP22.54■■□□□ 1.2
AC009446.1-201ENST00000519840 ZNF579Q8NAF0 562 aaKnown RBP22.5■■□□□ 1.19
AC009446.1-201ENST00000519840 GABBR2O75899 941 aa22.49■■□□□ 1.19
AC009446.1-201ENST00000519840 VASPP50552 380 aaPredicted RBP22.46■■□□□ 1.19
AC009446.1-201ENST00000519840 CLCN6P51797 869 aa22.45■■□□□ 1.18
AC009446.1-201ENST00000519840 TSPYL2Q9H2G4 693 aaPredicted RBP22.35■■□□□ 1.17
AC009446.1-201ENST00000519840 RASEFQ8IZ41 740 aa22.31■■□□□ 1.16
AC009446.1-201ENST00000519840 PHF12Q96QT6 1004 aa22.3■■□□□ 1.16
AC009446.1-201ENST00000519840 NUBP1P53384 320 aa22.27■■□□□ 1.16
AC009446.1-201ENST00000519840 CCDC61Q9Y6R9 512 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms