Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 AC092068.3-201ENST00000587894 2016 ntBASIC18.73■□□□□ 0.59
TRIM50Q86XT4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 AL021920.2-201ENST00000624828 1351 ntBASIC18.73■□□□□ 0.59
TRIM50Q86XT4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM50Q86XT4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.72■□□□□ 0.59
TRIM50Q86XT4 RBPMS2P1-201ENST00000437762 623 ntBASIC18.72■□□□□ 0.59
TRIM50Q86XT4 IGHV3-62-201ENST00000520057 340 ntBASIC18.72■□□□□ 0.59
TRIM50Q86XT4 DUX4L27-201ENST00000554796 1261 ntBASIC18.72■□□□□ 0.59
TRIM50Q86XT4 MIR4492-201ENST00000581627 80 ntBASIC18.72■□□□□ 0.59
TRIM50Q86XT4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 AL390955.2-201ENST00000603032 514 ntBASIC18.72■□□□□ 0.59
TRIM50Q86XT4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 AC108860.2-201ENST00000562760 2183 ntBASIC18.72■□□□□ 0.59
TRIM50Q86XT4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM50Q86XT4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM50Q86XT4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM50Q86XT4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
TRIM50Q86XT4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms