Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SGO1Q5FBB7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SGO1Q5FBB7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SGO1Q5FBB7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SGO1Q5FBB7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 KRT18P31-201ENST00000506277 1292 ntBASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AC106795.1-205ENST00000512851 1056 ntBASIC16.42■□□□□ 0.22
SGO1Q5FBB7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 PRELID1P1-202ENST00000567272 903 ntBASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AL121772.3-201ENST00000610840 674 ntBASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AL022326.1-202ENST00000641533 845 ntBASIC16.42■□□□□ 0.22
SGO1Q5FBB7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AL356309.3-201ENST00000624132 1934 ntBASIC16.42■□□□□ 0.22
SGO1Q5FBB7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SGO1Q5FBB7 AL391256.1-201ENST00000443260 1855 ntBASIC16.42■□□□□ 0.22
SGO1Q5FBB7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AC243591.1-201ENST00000452967 1364 ntBASIC16.41■□□□□ 0.22
SGO1Q5FBB7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AC091304.2-201ENST00000564639 760 ntBASIC16.41■□□□□ 0.22
SGO1Q5FBB7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AL590787.1-201ENST00000568856 1315 ntBASIC16.41■□□□□ 0.22
SGO1Q5FBB7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SGO1Q5FBB7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 AL021920.2-201ENST00000624828 1351 ntBASIC16.4■□□□□ 0.22
SGO1Q5FBB7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms