Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.97■□□□□ 0.47
CDR2Q01850 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDR2Q01850 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDR2Q01850 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDR2Q01850 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.96■□□□□ 0.47
CDR2Q01850 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 GGTLC5P-201ENST00000617623 998 ntBASIC17.96■□□□□ 0.47
CDR2Q01850 AL691432.3-201ENST00000621860 400 ntBASIC17.96■□□□□ 0.47
CDR2Q01850 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDR2Q01850 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDR2Q01850 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDR2Q01850 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDR2Q01850 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDR2Q01850 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDR2Q01850 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDR2Q01850 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDR2Q01850 SNX33P1-201ENST00000592116 1762 ntBASIC17.95■□□□□ 0.46
CDR2Q01850 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDR2Q01850 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.95■□□□□ 0.46
CDR2Q01850 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.95■□□□□ 0.46
CDR2Q01850 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDR2Q01850 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
CDR2Q01850 KRT18P67-201ENST00000432816 1264 ntBASIC17.95■□□□□ 0.46
CDR2Q01850 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.95■□□□□ 0.46
CDR2Q01850 AC091167.2-201ENST00000579581 588 ntBASIC17.95■□□□□ 0.46
CDR2Q01850 RN7SL510P-201ENST00000581311 263 ntBASIC17.95■□□□□ 0.46
CDR2Q01850 AC008667.4-201ENST00000607370 168 ntBASIC17.95■□□□□ 0.46
CDR2Q01850 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.95■□□□□ 0.46
CDR2Q01850 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.95■□□□□ 0.46
CDR2Q01850 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDR2Q01850 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDR2Q01850 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CDR2Q01850 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
CDR2Q01850 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.94■□□□□ 0.46
CDR2Q01850 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.94■□□□□ 0.46
CDR2Q01850 AC079781.3-201ENST00000449110 356 ntBASIC17.94■□□□□ 0.46
CDR2Q01850 AF186996.4-201ENST00000467186 377 ntBASIC17.94■□□□□ 0.46
CDR2Q01850 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 AC107918.2-201ENST00000530817 355 ntBASIC17.94■□□□□ 0.46
CDR2Q01850 AC105339.3-201ENST00000560043 636 ntBASIC17.94■□□□□ 0.46
CDR2Q01850 AC012640.2-201ENST00000561606 901 ntBASIC17.94■□□□□ 0.46
CDR2Q01850 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 AL356488.2-201ENST00000602755 427 ntBASIC17.94■□□□□ 0.46
CDR2Q01850 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 OR6D1P-203ENST00000641209 4860 ntBASIC17.94■□□□□ 0.46
CDR2Q01850 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.94■□□□□ 0.46
CDR2Q01850 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.94■□□□□ 0.46
CDR2Q01850 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDR2Q01850 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.94■□□□□ 0.46
CDR2Q01850 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.94■□□□□ 0.46
CDR2Q01850 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CDR2Q01850 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDR2Q01850 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms